miRBase entry: nve-mir-9424b

Stem-loop nve-mir-9424b


Accession
MI0029042
Description
Nematostella vectensis nve-mir-9424b precursor miRNA
Gene family
MIPF0002037; mir-9424


Sequence

459 reads, 350 reads per million, 13 experiments
uuuaagacugccucgaugagccaacuauacagauaucugUAAAGCUGGUUUAUCGAGGCAgucuuuaa
...((((((((((((((((((((.((.(((((....))))).)).))))))))))))))))))))...

Structure
uuu                    a  a     a 
   aagacugccucgaugagcca cu uacag u
   |||||||||||||||||||| || |||||  
   uucugACGGAGCUAUUUGGU GA AUguc a
aau                    C  A     u 


Annotation confidence Not enough data
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Genome context
scaffold_1498: 5518-5585 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from nve-mir-9424b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature nve-miR-9424b

Accession MIMAT0035392
Description Nematostella vectensis nve-miR-9424b mature miRNA
Sequence 40 - UAAAGCUGGUUUAUCGAGGCA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24642861
    Cnidarian microRNAs frequently regulate targets by cleavage
    "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
    "Genome Res (2014) 24:651-663