miRBase entry: nve-mir-9440-3

Stem-loop nve-mir-9440-3


Accession
MI0029056
Description
Nematostella vectensis nve-mir-9440-3 precursor miRNA
Gene family
MIPF0001915; mir-9440


Sequence

316 reads, 3164 reads per million, 20 experiments
caUAAUCAACGAGAGUGUCAACCUGccgcgaaggucuaugaguggucuguugcuucucuuuguggagc
......(((.(((((.(.((((..(((((..(......)..)))))..)))))))))).)))......

Structure
caUAAU   C     U U    CU     ga gg 
      CAA GAGAG G CAAC  Gccgc  a  u
      ||| ||||| | ||||  |||||  |   
      guu cucuu c guug  uggug  u  c
cgaggu   u     - -    uc     ag au 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_700: 37789-37856 [-]

Database links

Mature nve-miR-9440

Accession MIMAT0035401
Description Nematostella vectensis nve-miR-9440 mature miRNA
Sequence 3 - UAAUCAACGAGAGUGUCAACCUG - 25
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24642861
    Cnidarian microRNAs frequently regulate targets by cleavage
    "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
    "Genome Res (2014) 24:651-663