Stem-loop sequence bdi-MIR9480a

Accession

MI0029127 (change log)

Description

Brachypodium distachyon miR9480a stem-loop

Stem-loop

   --       agauaa  ua      --g        u 
5'   ccuuaca      ca  uaccac   uacauacu a
     |||||||      ||  ||||||   ||||||||  
3'   ggagugu      gu  auggug   guguaugg a
   ug       --guaa  ca      gga        g 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Bd21; GCA_000005505.1): 4: 31011548-31011617 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0029127

Mature sequence bdi-miR9480a

• Accession: MIMAT0035485
• Sequence: 39 - uaugugagggugguaacugaa - 59
• Evidence: not experimental

References

1. PMID:24367943 "Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon" Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ Genome Biol. 14:R145(2013).