Stem-loop sequence bdi-MIR159c

AccessionMI0029152 (change log)
DescriptionBrachypodium distachyon miR159c stem-loop
Stem-loop 
   --       aacaacauu     a  a   a   ---    aaaaa  -   u  -ca         gugcgacauacccugaucucgu 
5'   uacccaa         uagag cc ucc uca   caag     ag agu gc   aggggcagc                      c
     |||||||         ||||| || ||| |||   ||||     || ||| ||   |||||||||                      c
3'   guggguu         gucuc gg ggg agu   guuu     uc ucg cg   uccucgucg                      u
   cg       ---------     -  -   a   uug    acaug  g   u  ucg         gggcgccgcggccgcggcuggc
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Bd21; GCA_000005505.1) Overlapping transcripts
1: 302390-302552 [-]
intergenic
Database links

Mature sequence bdi-miR159c

Accession MIMAT0035510
Sequence

134 -  

uuugguuugaagggggcucug

 - 154

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Evidence not experimental

References

1
PMID:24367943 "Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon" Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ Genome Biol. 14:R145(2013).