Stem-loop bdi-MIR169m

Accession

MI0029158

Description

Brachypodium distachyon bdi-MIR169m precursor miRNA

Gene family

MIPF0000037; MIR169_2

Literature search

3 open access papers mention bdi-MIR169m
(27 sentences)

Sequence

cucuucgugUAGCCAAGGAUGACUUGCCGgccggccugcauauaugucuccaaauuaacaagcuuaacaagcuaggucggcaaguuguuugcuuuggcuacaugacugcc
....((((((((((((((((((((((((((((((...(((....)))..)).........(((((...))))).))))))))))))))...)))))))))))))).....

Structure

-cucu              ---              -----------------------  ccu   u 
     ucgugUAGCCAAGG   AUGACUUGCCGgcc                       gg   gca a
     ||||||||||||||   ||||||||||||||                       ||   |||  
     aguacaucgguuuc   uguugaacggcugg                       cc   ugu u
ccguc              guu              aucgaacaauucgaacaauuaaa  -uc   a 

Annotation confidence Not enough data

Genome context

3: 58636718-58636827 [+]

Mature bdi-miR169m

• Accession: MIMAT0035516
• Description: Brachypodium distachyon bdi-miR169m mature miRNA
• Sequence: 10 - UAGCCAAGGAUGACUUGCCG - 29
• Evidence: not_experimental

References

1. PubMed ID: 24367943
   Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
   Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
   Genome Biol (2013) 14:R145