miRBase entry: bdi-MIR531

Stem-loop bdi-MIR531


Accession
MI0029170
Description
Brachypodium distachyon bdi-MIR531 precursor miRNA


Sequence

cgguggcGAUGCUCGCCGGAGCAGCGUGCUGggucuuagccccgcacgcuccuucgucgaguuuggcuaccguc
(((((((.(.(((((.(((((.(((((((.((((....)))).))))))).))))).))))).).)))))))..

Structure
--       G U     C     C       U    c 
  cgguggc A GCUCG CGGAG AGCGUGC Gggu u
  ||||||| | ||||| ||||| ||||||| ||||  
  gccaucg u ugagc gcuuc ucgcacg cccg u
cu       g u     u     c       c    a 


Annotation confidence Not enough data
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Genome context
2: 9542419-9542492 [+]

Database links

Mature bdi-miR531

Accession MIMAT0035528
Description Brachypodium distachyon bdi-miR531 mature miRNA
Sequence 8 - GAUGCUCGCCGGAGCAGCGUGCUG - 31
Evidence not_experimental

References

  1. PubMed ID: 24367943
    Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
    Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
    Genome Biol (2013) 14:R145