miRBase entry: bdi-MIR2275b

Stem-loop bdi-MIR2275b


Accession
MI0029176
Description
Brachypodium distachyon bdi-MIR2275b precursor miRNA

Literature search
2 open access papers mention bdi-MIR2275b
(5 sentences)

Sequence

uauacaugcgcuguucaaagcgaggauuagaagggacugaaucaucuauuagaaaugauggUUCAGUUUCUUCUAAUAUCUCAccuugaaugguccaucugugaagc
((((.(((.(((((((((.(.(((((((((((((((((((((((((..........))))))))))))))))))))).)))).).))))))))).))).))))....

Structure
----    c   c         a c    -                     uauu 
    uaua aug gcuguucaa g gagg auuagaagggacugaaucauc    a
    |||| ||| ||||||||| | |||| |||||||||||||||||||||     
    gugu uac ugguaaguu c CUCU UAAUCUUCUUUGACUUgguag    g
cgaa    c   c         c A    A                     uaaa 


Annotation confidence Not enough data
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Genome context
3: 13941819-13941925 [+]

Database links

Mature bdi-miR2275b

Accession MIMAT0035534
Description Brachypodium distachyon bdi-miR2275b mature miRNA
Sequence 62 - UUCAGUUUCUUCUAAUAUCUCA - 83
Evidence not_experimental

References

  1. PubMed ID: 24367943
    Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
    Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
    Genome Biol (2013) 14:R145