Stem-loop sequence bdi-MIR2275c

AccessionMI0029177 (change log)
DescriptionBrachypodium distachyon miR2275c stem-loop
Gene family MIPF0000797; MIR2275
Literature search

2 open access papers mention bdi-MIR2275c
(5 sentences)

Stem-loop
        -a  c    u       -     u             ca   g 
5' cuggg  ag ugaa gugagau uugga ggaaccaaaucuu  gcu c
   |||||  || |||| ||||||| ||||| |||||||||||||  ||| a
3' gaccc  uc acuu cacucua aaccu cuuugguuuagaa  cgg u
        cg  a    c       u     c             ca   u 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Bd21; GCA_000005505.1) Overlapping transcripts
3: 12514129-12514225 [+]
intergenic
Clustered miRNAs
< 10kb from bdi-MIR2275c
bdi-MIR2275a3: 12513972-12514077 [+]
bdi-MIR2275c3: 12514129-12514225 [+]
Database links

Mature sequence bdi-miR2275c

Accession MIMAT0035535
Sequence

60 - 

uuugguuuccuccaauaucuca

 - 81

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Evidence not experimental

References

1
PMID:24367943 "Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon" Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ Genome Biol. 14:R145(2013).