Stem-loop bma-mir-9501

Accession

MI0029189

Description

Brugia malayi bma-mir-9501 precursor miRNA

Sequence

acuauccaaaaaagaauaacuauccuaaguuuaagaauaauccauaagccuuacgaaaauccguaaagcuuauggguagcguacggaaagccgCAAGGCUUAUGGGUUAUUCUUAAacuuaguuuauggauaccuaugc
..((((((............((..((((((((((((((((((((((((((((.((....((((((..(((.......))).))))))....)).))))))))))))))))))))))))))))..)))))))).......

Structure

-----ac      aaaaagaauaac  uc                            a  aaaa      aa   ua 
       uaucca            ua  cuaaguuuaagaauaauccauaagccuu cg    uccgua  gcu  u
       ||||||            ||  |||||||||||||||||||||||||||| ||    ||||||  |||  g
       auaggu            au  gauucaAAUUCUUAUUGGGUAUUCGGAA gc    aggcau  cga  g
cguaucc      ------------  uu                            C  cgaa      -g   ug 

Annotation confidence Not enough data

Genome context

Bmal_v3_scaffold3: 2342784-2342922 [+]

Mature bma-miR-9501-3p

• Accession: MIMAT0037489
• Description: Brugia malayi bma-miR-9501-3p mature miRNA
• Sequence: 94 - CAAGGCUUAUGGGUUAUUCUUAA - 116
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24824352
   Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
   Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
   PLoS One (2014) 9:e96498