miRBase entry: bma-mir-9517

Stem-loop bma-mir-9517


Accession
MI0029208
Description
Brugia malayi bma-mir-9517 precursor miRNA


Sequence

ugacuuuaaagaaauuuaAGCUCCUCCUAGCUAAUUUGCAucauaucuaugUAAAUUAGCUAGGAGGAGCCUAaauuacuuuuggaugauuuu
...((..((((.((((((.((((((((((((((((((((((.......)))))))))))))))))))))).)))))).)))).))........

Structure
-----uga  uu    a      A                      ca 
        cu  aaag aauuua GCUCCUCCUAGCUAAUUUGCAu  u
        ||  |||| |||||| ||||||||||||||||||||||  a
        gg  uuuc uuaaAU CGAGGAGGAUCGAUUAAAUgua  u
uuuuagua  -u    a      C                      uc 


Annotation confidence Not enough data
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Genome context
Bmal_v3_scaffold6: 1408811-1408903 [+]

Database links

Mature bma-miR-9517-5p

Accession MIMAT0037510
Description Brugia malayi bma-miR-9517-5p mature miRNA
Sequence 19 - AGCUCCUCCUAGCUAAUUUGCA - 40
Evidence experimental
Illumina [1]

Mature bma-miR-9517-3p

Accession MIMAT0037511
Description Brugia malayi bma-miR-9517-3p mature miRNA
Sequence 52 - UAAAUUAGCUAGGAGGAGCCUA - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24824352
    Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
    Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
    PLoS One (2014) 9:e96498