Stem-loop dvi-mir-252

Accession

MI0029245

Description

Drosophila virilis dvi-mir-252 precursor miRNA

Gene family

MIPF0000285; mir-252

Literature search

1 open access papers mention dvi-mir-252
(2 sentences)

Sequence

uuaguuugugaccaggacauauugcuuucCUAAGUACUAGUGCCGCAGGAGuuagguuuguguccgcaaugccuCCUGCUGCCCAAGUGCUUAUUaaagcgacuaguuuuccaccagcaa
...(((.(((...(((((...(((((((..((((((((.(.((.((((((....(((((((....)))).))))))))).)).).))))))))..)))))))...))))).))).)))..

Structure

uua   u   acc     aua       cC        A U  C      Guua   -    g 
   guu gug   aggac   uugcuuu  UAAGUACU G GC GCAGGA    ggu uugu u
   ||| |||   |||||   |||||||  |||||||| | || ||||||    ||| ||||  
   cga cac   uuuug   agcgaaa  AUUCGUGA C CG CGUCCu    ccg aacg c
-aa   c   --c     auc       UU        A C  U      ----   u    c 

Annotation confidence Not enough data

Genome context

scaffold_12855: 2861497-2861616 [+]

Mature dvi-miR-252-5p

• Accession: MIMAT0035564
• Description: Drosophila virilis dvi-miR-252-5p mature miRNA
• Sequence: 30 - CUAAGUACUAGUGCCGCAGGAG - 51
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-252-3p

• Accession: MIMAT0035565
• Description: Drosophila virilis dvi-miR-252-3p mature miRNA
• Sequence: 75 - CCUGCUGCCCAAGUGCUUAUU - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372