miRBase entry: dvi-mir-956

Stem-loop dvi-mir-956


Accession
MI0029252
Description
Drosophila virilis dvi-mir-956 precursor miRNA
Gene family
MIPF0001983; mir-956


Sequence

gaucguuaucguguuuggaauggucucguuagcUAACGGAUGAACAUUGACCAAAGCgcaccuuacagcguaguguagUUUCGAGACCACUCUAAUCCAUUgcauc
..........(((.(((((.((((((((..(((((................((..((((........))))..))))))).)))))))).)))))..)))......

Structure
gaucguuauc   -u     a        uu     ACGGAUGAACAUUGAC  AA    acc 
          gug  uugga uggucucg  agcUA                CA  GCgc   u
          |||  ||||| ||||||||  |||||                ||  ||||    
          UAC  AAUCU ACCAGAGC  UUgau                gu  ugcg   u
----cuacgU   CU     C        -U     ----------------  ga    aca 


Annotation confidence Not enough data
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Genome context
scaffold_13049: 23989411-23989516 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dvi-mir-956
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dvi-miR-956-5p

Accession MIMAT0035576
Description Drosophila virilis dvi-miR-956-5p mature miRNA
Sequence 34 - UAACGGAUGAACAUUGACCAAAGC - 57
Evidence experimental
Illumina [1]

Mature dvi-miR-956-3p

Accession MIMAT0035577
Description Drosophila virilis dvi-miR-956-3p mature miRNA
Sequence 79 - UUUCGAGACCACUCUAAUCCAUU - 101
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24448446
    Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "RNA (2014) 20:360-372