miRBase entry: dvi-mir-965

Stem-loop dvi-mir-965


Accession
MI0029258
Description
Drosophila virilis dvi-mir-965 precursor miRNA
Gene family
MIPF0000708; mir-965


Sequence

aaaaacacacacacaaauguuuagGGGGUCAAACUGUACGUUGUAUGugcaaaugaugaaauucaUAAGCGUAUAGCUUUUCCCCUuaaacguugaugugacgacaa
.........((((..(((((((((((((..((.(((((((((.((((................))))))))))))).))..)))))))))))))..)))).......

Structure
aaaaacaca    ca             UC  A         G    ugcaaau 
         caca  aauguuuagGGGG  AA CUGUACGUU UAUG       g
         ||||  |||||||||||||  || ||||||||| ||||        
         gugu  uugcaaauUCCCC  UU GAUAUGCGA AUac       a
--aacagca    ag             UU  C         -    uuaaagu 


Annotation confidence Not enough data
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Genome context
scaffold_12963: 8856406-8856512 [+]

Database links

Mature dvi-miR-965-5p

Accession MIMAT0035584
Description Drosophila virilis dvi-miR-965-5p mature miRNA
Sequence 25 - GGGGUCAAACUGUACGUUGUAUG - 47
Evidence experimental
Illumina [1]

Mature dvi-miR-965-3p

Accession MIMAT0035585
Description Drosophila virilis dvi-miR-965-3p mature miRNA
Sequence 66 - UAAGCGUAUAGCUUUUCCCCU - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24448446
    Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "RNA (2014) 20:360-372