Stem-loop dvi-mir-988

Accession

MI0029268

Description

Drosophila virilis dvi-mir-988 precursor miRNA

Gene family

MIPF0000724; mir-988

Sequence

uguaauauaucugcgcauuuugggcGUGUGAUUUGUGGCAAAGUGAUgagcuuggauuccauCCCCUUGUUGCAAACCUCACGCcaaagguggcgcauuuaaccagcaauauaa
(((....((..((((((((((.((((((.(.((((((((((.(.((((...........)))).).)))))))))).).)))))).))))).)))))..))....)))......

Structure

------   aaua  uc     -     g      U A          A U    agcu 
      ugu    ua  ugcgc auuuu ggcGUG G UUUGUGGCAA G GAUg    u
      |||    ||  ||||| ||||| |||||| | |||||||||| | ||||    g
      acg    au  acgcg uggaa cCGCAC C AAACGUUGUU C Cuac    g
aauaua   acca  uu     g     a      U C          C C    cuua 

Annotation confidence Not enough data

Genome context

scaffold_12875: 19840368-19840481 [+]

Mature dvi-miR-988-5p

• Accession: MIMAT0035600
• Description: Drosophila virilis dvi-miR-988-5p mature miRNA
• Sequence: 26 - GUGUGAUUUGUGGCAAAGUGAU - 47
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-988-3p

• Accession: MIMAT0035601
• Description: Drosophila virilis dvi-miR-988-3p mature miRNA
• Sequence: 63 - CCCCUUGUUGCAAACCUCACGC - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372