miRBase entry: dvi-mir-993

Stem-loop dvi-mir-993


Accession
MI0029270
Description
Drosophila virilis dvi-mir-993 precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

gggugaagugggggucagugaauaacagaaacgcucccgugacCUACCCUGUAGUUCCGGGCUUUuguuuauagugcauucaaaugccauucucaauuaucaGAAGCUCGUCUCUACAGGUAUCUcacaggguagaaagaaacaacucaaaaagcgaauuuguugaauu
.(.(((........))).)...(((((((..(((((((((((..((((.(((((...((((((((((...(((((((((....))))........)))))))))))))))...)))))))))..)))).)))....................))))..)))))))....

Structure
gggugaagugggggucagugaa       aa    --------------------   -    cC    C     UUC          uuu     --------    u 
                      uaacaga  cgcu                    ccc guga  UACC UGUAG   CGGGCUUUug   auagu        gcau c
                      |||||||  ||||                    ||| ||||  |||| |||||   ||||||||||   |||||        ||||  
                      guuguuu  gcga                    ggg cacU  AUGG ACAUC   GCUCGAAGac   uauua        cgua a
------------------uuaa       aa    aaaacucaacaaagaaagau   a    CU    -     UCU          ---     acucuuac    a 


Annotation confidence Not enough data
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Genome context
scaffold_13047: 6141821-6141989 [-]

Database links

Mature dvi-miR-993-5p

Accession MIMAT0035604
Description Drosophila virilis dvi-miR-993-5p mature miRNA
Sequence 44 - CUACCCUGUAGUUCCGGGCUUU - 65
Evidence experimental
Illumina [1]

Mature dvi-miR-993-3p

Accession MIMAT0035605
Description Drosophila virilis dvi-miR-993-3p mature miRNA
Sequence 103 - GAAGCUCGUCUCUACAGGUAUCU - 125
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24448446
    Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "RNA (2014) 20:360-372