miRBase entry: dvi-mir-994

Stem-loop dvi-mir-994


Accession
MI0029271
Description
Drosophila virilis dvi-mir-994 precursor miRNA


Sequence

uuugauuuauaucgaguuaucUAAGGAAAUAGUAGCCGUGAUUuuacauuagaagcuuucacauauCACAGUUGCUGUUUCUUUUAGAUagcucuuuuguaagcagc
.(((.((((((..(((((((((((((((((((((((.(((((......................))))).))))))))))).))))))))))))...))))))))).

Structure
u   a      -uc            -           C     Uuuacauuag 
 uug uuuaua   gaguuaucUAAG GAAAUAGUAGC GUGAU          a
 ||| ||||||   |||||||||||| ||||||||||| |||||           
 gac gaaugu   cucgaUAGAUUU CUUUGUCGUUG CACua          a
c   -      uuu            U           A     uacacuuucg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_13047: 1194168-1194274 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dvi-mir-994
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dvi-miR-994-5p

Accession MIMAT0035606
Description Drosophila virilis dvi-miR-994-5p mature miRNA
Sequence 22 - UAAGGAAAUAGUAGCCGUGAUU - 43
Evidence experimental
Illumina [1]

Mature dvi-miR-994-3p

Accession MIMAT0035607
Description Drosophila virilis dvi-miR-994-3p mature miRNA
Sequence 67 - CACAGUUGCUGUUUCUUUUAGAU - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24448446
    Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "RNA (2014) 20:360-372