Stem-loop sequence dvi-mir-9546

Accession

MI0029286 (change log)

Description

Drosophila virilis miR-9546 stem-loop

Stem-loop

   acguu    -  u    -            ua        -    ug  a 
5'      ucgu cu ggau uuuaaggauuua  acaaauuu cauu  uu u
        |||| || |||| ||||||||||||  |||||||| ||||  ||  
3'      agca gg ccua agauuccuaagu  uguuuaaa guaa  ga u
   ugaac    c  u    c            ca        a    uu  u 

Confidence

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Genome context

• Coordinates (DroVir3): scaffold_13042: 4534963-4535061 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0029286

Mature sequence dvi-miR-9546-5p

• Accession: MIMAT0035636
• Sequence: 19 - uaaggauuuauaacaaauuu - 38
• Evidence: experimental; Illumina [1]

Mature sequence dvi-miR-9546-3p

• Accession: MIMAT0035637
• Sequence: 59 - aaaauuuguacugaauccuuaga - 81
• Evidence: experimental; Illumina [1]

References

1. PMID:24448446 "Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis" Ninova M, Ronshaugen M, Griffiths-Jones S RNA. 20:360-372(2014).