Stem-loop gga-mir-19b-2

Accession

MI0029332

Description

Gallus gallus gga-mir-19b-2 precursor miRNA

Literature search

4 open access papers mention gga-mir-19b-2
(10 sentences)

Sequence

2129578 reads, 2000.0 reads per million, 260 experiments

gcugcucacagucAGUUUUGCAGGUUUGCAUCCCAGCuugcuaaaauugcUGUGCAAAUCCAUGCAAAACUGAcugugguggu
(((((.((((((((((((((((((((((((...((((...........)))))))))).)).)))))))))))))))))))))

Structure

     u                -  -      UCC    uugc 
gcugc cacagucAGUUUUGCA GG UUUGCA   CAGC    u
||||| |||||||||||||||| || ||||||   ||||    a
uggug gugucAGUCAAAACGU CC AAACGU   GUcg    a
     -                A  U      ---    uuaa 

Annotation confidence High

Genome context

4: 3924020-3924102 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from gga-mir-19b-2

Mature gga-miR-19b-2-5p

• Accession: MIMAT0051308
• Description: Gallus gallus gga-miR-19b-2-5p mature miRNA
• Sequence: 14 - AGUUUUGCAGGUUUGCAUCCCAGC - 37
• Evidence: experimental ; cloned [2], Illumina [3]

Mature gga-miR-19b-3p

• Accession: MIMAT0001110
• Description: Gallus gallus gga-miR-19b-3p mature miRNA
• Sequence: 51 - UGUGCAAAUCCAUGCAAAACUGA - 73
• Evidence: experimental ; cloned [2], Illumina [3]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196