miRBase entry: gga-mir-363

Stem-loop gga-mir-363


Accession
MI0029344
Description
Gallus gallus gga-mir-363 precursor miRNA

Literature search
0 open access papers mention gga-mir-363
(0 sentences)

Sequence

39612 reads, 1065 reads per million, 5 experiments
guaagcuuuguuuugcuguugucggGUGGAUCACGAUGCAAUUUUGAuuaguuuaguaggagaaaAAUUGCACGGUAUCCAUCUGUAAaccgcaagaccuucauccg
.........(((((((.(((..(((((((((..((.(((((((((..(((......)))....)))))))))))..)))))))))..))).))))))).........

Structure
guaagcuuu       u   gu         CA  A         --GA   gu 
         guuuugc guu  cggGUGGAU  CG UGCAAUUUU    uua  u
         ||||||| |||  |||||||||  || |||||||||    |||   
         cagaacg caA  GUCUACCUA  GC ACGUUAAaa    gau  u
gccuacuuc       c   AU         UG  -         agag   ga 


Annotation confidence High
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Genome context
chr4: 3994409-3994515 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from gga-mir-363
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-363-5p

Accession MIMAT0037553
Description Gallus gallus gga-miR-363-5p mature miRNA
Sequence 26 - GUGGAUCACGAUGCAAUUUUGA - 47
Evidence experimental
Illumina [2]

Mature gga-miR-363-3p

Accession MIMAT0037554
Description Gallus gallus gga-miR-363-3p mature miRNA
Sequence 66 - AAUUGCACGGUAUCCAUCUGUAA - 88
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196

  2. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973