miRBase entry: aca-let-7a-3

Stem-loop aca-let-7a-3


Accession
MI0029347
Description
Anolis carolinensis aca-let-7a-3 precursor miRNA

Literature search
1 open access papers mention aca-let-7a-3
(1 sentences)

Sequence

gggUGAGGUAGUAGGUUGUAUAGUUuuaggguucugcccugccugucacauaaCUAUACAAUCUACUGUCUUUCcu
(((.(((((((((((((((((((((.((((((...))))))..........))))))))))))))))))))).)))

Structure
   U                     ---------u      u 
ggg GAGGUAGUAGGUUGUAUAGUU          uagggu  
||| |||||||||||||||||||||          |||||| c
ucC UUCUGUCAUCUAACAUAUCaa          gucccg  
   U                     uacacugucc      u 


Annotation confidence Not enough data
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Genome context
chr5: 83533339-83533414 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from aca-let-7a-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature aca-let-7a-5p

Accession MIMAT0021692
Description Anolis carolinensis aca-let-7a-5p mature miRNA
Sequence 4 - UGAGGUAGUAGGUUGUAUAGUU - 25
Evidence experimental
Illumina [1]

Mature aca-let-7a-3-3p

Accession MIMAT0037558
Description Anolis carolinensis aca-let-7a-3-3p mature miRNA
Sequence 54 - CUAUACAAUCUACUGUCUUUC - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196