miRBase entry: aca-mir-9577

Stem-loop aca-mir-9577


Accession
MI0029366
Description
Anolis carolinensis aca-mir-9577 precursor miRNA


Sequence

cccuucuacacUGGCCCAAACUCUUAUGAAAUCaguauuuaaagccccaaUUUCAUGAGAAUUUGGUGCUCGugcaggcggc
.((.(((.(((.((((((((.(((((((((((.................))))))))))).))))).))).))).))).)).

Structure
c  u   a   U   -     C           Caguauu 
 cc ucu cac GGC CCAAA UCUUAUGAAAU       u
 || ||| ||| ||| ||||| |||||||||||       a
 gg gga guG UCG GGUUU AGAGUACUUUa       a
c  c   c   C   U     A           accccga 


Annotation confidence Not enough data
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Genome context
chr5: 87965757-87965838 [-]

Database links

Mature aca-miR-9577-5p

Accession MIMAT0037588
Description Anolis carolinensis aca-miR-9577-5p mature miRNA
Sequence 12 - UGGCCCAAACUCUUAUGAAAUC - 33
Evidence experimental
Illumina [1]

Mature aca-miR-9577-3p

Accession MIMAT0037589
Description Anolis carolinensis aca-miR-9577-3p mature miRNA
Sequence 51 - UUUCAUGAGAAUUUGGUGCUCG - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196