miRBase entry: xtr-mir-460a

Stem-loop xtr-mir-460a


Accession
MI0029368
Description
Xenopus tropicalis xtr-mir-460a precursor miRNA


Sequence

uggcuuuauagagccugcauuguacacacugugugugcaccucagacuugCACAGCGCAUACAAUGUGGAUGCuauaugaguc
.((((((((((...((((((((((.....((((((((((.........)))))).))))))))))))))...))))).)))))

Structure
u     -     agc          cacac    -      ccu 
 ggcuu uauag   cugcauugua     ugug ugugca   c
 ||||| |||||   ||||||||||     |||| ||||||   a
 cugag auauC   GGUGUAACAU     ACGC ACACgu   g
-     u     GUA          -----    G      uca 


Annotation confidence Not enough data
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Genome context
chr6: 3768586-3768668 [-]

Database links

Mature xtr-miR-460a-3p

Accession MIMAT0037591
Description Xenopus tropicalis xtr-miR-460a-3p mature miRNA
Sequence 51 - CACAGCGCAUACAAUGUGGAUGC - 73
Evidence not_experimental

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196