miRBase entry: cpi-mir-26-2

Stem-loop cpi-mir-26-2


Accession
MI0029416
Description
Chrysemys picta cpi-mir-26-2 precursor miRNA


Sequence

ugcggaggccguagcccggUUCAAGUAAUCCAGGAUAGGCUguuaccaggcagcacggCCUAUUCUUGAUUACUUGUUUCaggaggcggcugcuggcg
..(((.((((((..((.((..(((((((((.((((((((((((...........)))))))))))).)))))))))..)).))..)))))).)))...

Structure
-ug   a      ag  c  UU         C            uacc 
   cgg ggccgu  cc gg  CAAGUAAUC AGGAUAGGCUgu    a
   ||| ||||||  || ||  ||||||||| ||||||||||||    g
   guc ucggcg  gg CU  GUUCAUUAG UCUUAUCCggca    g
gcg   g      ga  a  UU         U            cgac 


Annotation confidence Not enough data
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Genome context
KK088209.1: 19565507-19565604 [-]

Database links

Mature cpi-miR-26-5p

Accession MIMAT0037660
Description Chrysemys picta cpi-miR-26-5p mature miRNA
Sequence 20 - UUCAAGUAAUCCAGGAUAGGCU - 41
Evidence experimental
Illumina [1]

Mature cpi-miR-26-2-3p

Accession MIMAT0037662
Description Chrysemys picta cpi-miR-26-2-3p mature miRNA
Sequence 59 - CCUAUUCUUGAUUACUUGUUUC - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196