Stem-loop cpi-mir-33-2

Accession

MI0029433

Description

Chrysemys picta cpi-mir-33-2 precursor miRNA

Sequence

aguggccgcagcugugGUGCAUUGUAGUUGCAUUGCAugugugagaacaggugugCAAUGCCCCUGCAGUGCAGCCcagauggggcuucuu
((.((((.((.(((.((((((((((((..(((((((((((.((....)).)))))))))))..)))))))))).))))).)).)))).)).

Structure

-  u    g  g   u  -          UU           g  a 
 ag ggcc ca cug gG UGCAUUGUAG  GCAUUGCAugu ug g
 || |||| || ||| || ||||||||||  ||||||||||| ||  
 uc ucgg gu gac CC ACGUGACGUC  CGUAACgugug ac a
u  u    g  a   -  G          CC           g  a 

Annotation confidence Not enough data

Genome context

KK088234.1: 10369055-10369145 [-]

Mature cpi-miR-33-5p

• Accession: MIMAT0037689
• Description: Chrysemys picta cpi-miR-33-5p mature miRNA
• Sequence: 17 - GUGCAUUGUAGUUGCAUUGCA - 37
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-33-2-3p

• Accession: MIMAT0037691
• Description: Chrysemys picta cpi-miR-33-2-3p mature miRNA
• Sequence: 56 - CAAUGCCCCUGCAGUGCAGCC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196