Stem-loop cpi-mir-155b

Accession

MI0029499

Description

Chrysemys picta cpi-mir-155b precursor miRNA

Sequence

cuugccagaaagugUUAAUGCUACUCAUGUUAGGGGugugaaaugaaguagccccuugccugguagcauuggcccuuacugagaaacaagccc
((((((((.(((.(((((((((((.((.((.((((((.............)))))).)).))))))))))))).))).))).)...))))...

Structure

---    --- -   a   u           U  U  U      gugaa 
   cuug   c cag aag gUUAAUGCUAC CA GU AGGGGu     a
   ||||   | ||| ||| ||||||||||| || || ||||||     u
   gaac   g guc uuc cgguuacgaug gu cg uccccg     g
ccc    aaa a   a   c           -  c  u      augaa 

Annotation confidence Not enough data

Genome context

KK088224.1: 3287743-3287835 [-]

Mature cpi-miR-155b-5p

• Accession: MIMAT0037790
• Description: Chrysemys picta cpi-miR-155b-5p mature miRNA
• Sequence: 15 - UUAAUGCUACUCAUGUUAGGGG - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196