miRBase entry: cpi-mir-203

Stem-loop cpi-mir-203


Accession
MI0029527
Description
Chrysemys picta cpi-mir-203 precursor miRNA


Sequence

gcgggcagccuccuuggugcAGUGGUUCUUAACAGUUCAACAGuucucuagcauaauuGUGAAAUGUUUAGGACCACUUGAccaggaaggcccggg
.(((((....((((.(((..(((((((((.((((.((((.(((((.........))))))))).)))).)))))))))..)))))))..)))))..

Structure
-g     agcc    u   gc         U    G    A     cuc 
  cgggc    uccu ggu  AGUGGUUCU AACA UUCA CAGuu   u
  |||||    |||| |||  ||||||||| |||| |||| |||||   a
  gcccg    agga ccA  UCACCAGGA UUGU AAGU Guuaa   g
gg     --ga    -   GU         U    A    -     uac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KK082923.1: 4391809-4391904 [-]

Database links

Mature cpi-miR-203-5p

Accession MIMAT0037825
Description Chrysemys picta cpi-miR-203-5p mature miRNA
Sequence 21 - AGUGGUUCUUAACAGUUCAACAG - 43
Evidence experimental
Illumina [1]

Mature cpi-miR-203-3p

Accession MIMAT0037826
Description Chrysemys picta cpi-miR-203-3p mature miRNA
Sequence 59 - GUGAAAUGUUUAGGACCACUUGA - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196