miRBase entry: cpi-mir-208

Stem-loop cpi-mir-208


Accession
MI0029534
Description
Chrysemys picta cpi-mir-208 precursor miRNA


Sequence

uuccucuaacagggAAGCUUUUGGCUCGGGUUAUAUuuucacucgcggcguauaagacgagcaaaaagcuuguugguuggaggaga
((((((((((.((.((((((((.(((((..((((((..((......)).))))))..))))).)))))))).)).)))))))))).

Structure
-          a  g        G     GG      uu  ac 
 uuccucuaac gg AAGCUUUU GCUCG  UUAUAU  uc  u
 |||||||||| || |||||||| |||||  ||||||  ||   
 gaggagguug uu uucgaaaa cgagc  aauaug  gg  c
a          g  g        a     ag      -c  cg 


Annotation confidence Not enough data
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Genome context
KK083131.1: 1021794-1021879 [+]

Database links

Mature cpi-miR-208-5p

Accession MIMAT0037835
Description Chrysemys picta cpi-miR-208-5p mature miRNA
Sequence 15 - AAGCUUUUGGCUCGGGUUAUAU - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196