miRBase entry: cpi-mir-216b

Stem-loop cpi-mir-216b


Accession
MI0029540
Description
Chrysemys picta cpi-mir-216b precursor miRNA


Sequence

aagucauagacugggAAAUCUCUGCAGGCAAAUGUGauguauuuauagcaaucucacaauuaccuguagaguuucugcaaucug
......((((.(((((((.(((((((((.((.((((((((.......)))...))))).)).)))))))))))))).)).))))

Structure
aaguca    c  -     U         C  A     ---   au 
      uaga ug ggAAA CUCUGCAGG AA UGUGa   ugu  u
      |||| || ||||| ||||||||| || |||||   |||  u
      gucu ac ucuuu gagaugucc uu acacu   acg  a
------    a  g     -         a  a     cua   au 


Annotation confidence Not enough data
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Genome context
KK083117.1: 219536-219619 [-]

Database links

Mature cpi-miR-216b-5p

Accession MIMAT0037844
Description Chrysemys picta cpi-miR-216b-5p mature miRNA
Sequence 16 - AAAUCUCUGCAGGCAAAUGUG - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196