miRBase entry: cpi-mir-302d

Stem-loop cpi-mir-302d


Accession
MI0029555
Description
Chrysemys picta cpi-mir-302d precursor miRNA


Sequence

ccccucuacuuuaacauggaaguacuugcuggaugcuugaaaaagUAAGUGCUUCCAUGUUUUAGUUguggugaauccu
..((.(.(((..((((((((((((((((((.............))))))))))))))))))..))).).))........

Structure
------cc  u u   uu                  ggaug 
        cc c acu  aacauggaaguacuugcu     c
        || | |||  ||||||||||||||||||     u
        gg g UGA  UUGUACCUUCGUGAAUga     u
uccuaagu  u U   UU                  aaaag 


Annotation confidence Not enough data
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Genome context
KK082956.1: 5875126-5875204 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from cpi-mir-302d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpi-miR-302d-3p

Accession MIMAT0037863
Description Chrysemys picta cpi-miR-302d-3p mature miRNA
Sequence 46 - UAAGUGCUUCCAUGUUUUAGUU - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196