miRBase entry: cpi-mir-456

Stem-loop cpi-mir-456


Accession
MI0029573
Description
Chrysemys picta cpi-mir-456 precursor miRNA


Sequence

uguaugugugagcaggcaucuuuucagccuacauguggauuccuaaaucugCAGGCUGGUUAGAUGGUUGUCauacguucaucug
((.((((((((.(((.(((((..(((((((....(((((((....))))))))))))))..))))).))))))))))).))....

Structure
----  u        g   g     uu       acau       c 
    ug auguguga cag caucu  ucagccu    guggauu c
    || |||||||| ||| |||||  |||||||    |||||||  
    ac ugcauaCU GUU GUAGA  GGUCGGA    Cgucuaa u
gucu  u        -   G     UU       ----       a 


Annotation confidence Not enough data
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Genome context
chr3: 16069409-16069493 [+]

Database links

Mature cpi-miR-456-3p

Accession MIMAT0037889
Description Chrysemys picta cpi-miR-456-3p mature miRNA
Sequence 52 - CAGGCUGGUUAGAUGGUUGUC - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196