miRBase entry: cpi-mir-460b

Stem-loop cpi-mir-460b


Accession
MI0029577
Description
Chrysemys picta cpi-mir-460b precursor miRNA


Sequence

uggcucuauguugUCCUCAUUGUACAUGCUGUGUGuauuuuuauuacauacacagcgcaugcaauguggacauaauggagauca
(((((((((..(((((.(((((((..((((((((((...........))))))))))..))))))).)))))..)))))).)))

Structure
   -      gu     U       CA          auuu 
ugg cucuau  ugUCC CAUUGUA  UGCUGUGUGu    u
||| ||||||  ||||| |||||||  ||||||||||    u
acu gaggua  acagg guaacgu  gcgacacaua    a
   a      au     u       ac          cauu 


Annotation confidence Not enough data
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Genome context
KK088187.1: 1737377-1737460 [+]

Database links

Mature cpi-miR-460b-5p

Accession MIMAT0037896
Description Chrysemys picta cpi-miR-460b-5p mature miRNA
Sequence 14 - UCCUCAUUGUACAUGCUGUGUG - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196