miRBase entry: cpi-mir-1662

Stem-loop cpi-mir-1662


Accession
MI0029593
Description
Chrysemys picta cpi-mir-1662 precursor miRNA


Sequence

ugugcucuauggguUUGACAUCAUCAUACUUGAGAUguaugacacaaaguCCCAAGCAGGCUGAUGUCAGGcccaagauggcug
.((..(((.((((((((((((((.(...((((.(((............))).))))...).)))))))))))))))))..))..

Structure
-u  gc   a              U AUA    A   guaug 
  gu  ucu uggguUUGACAUCA C   CUUG GAU     a
  ||  ||| |||||||||||||| |   |||| |||      
  cg  aga acccGGACUGUAGU G   GAAC Cug     c
gu  gu   -              C GAC    C   aaaca 


Annotation confidence Not enough data
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Genome context
KK082971.1: 3853380-3853463 [-]

Database links

Mature cpi-miR-1662-5p

Accession MIMAT0037918
Description Chrysemys picta cpi-miR-1662-5p mature miRNA
Sequence 15 - UUGACAUCAUCAUACUUGAGAU - 36
Evidence experimental
Illumina [1]

Mature cpi-miR-1662-3p

Accession MIMAT0037919
Description Chrysemys picta cpi-miR-1662-3p mature miRNA
Sequence 51 - CCCAAGCAGGCUGAUGUCAGG - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196