miRBase entry: ami-mir-26-2

Stem-loop ami-mir-26-2


Accession
MI0029683
Description
Alligator mississippiensis ami-mir-26-2 precursor miRNA


Sequence

cauggggucacggcccggUUCAAGUAAUCCAGGAUAGGCUggugccaggcccguggCCUAUUCUCGAUUACUUGUCUcgggacguggcugcuggca
((.(.(((((((.(((((..(((((((((.((((((((((((.((...))))..)))))))))).)))))))))..))))).))))))).)))...

Structure
---  u g       g     UU         C          --  u  c 
   ca g ggucacg cccgg  CAAGUAAUC AGGAUAGGCU  gg gc  
   || | ||||||| |||||  ||||||||| ||||||||||  || || a
   gu c ucggugc gggcU  GUUCAUUAG UCUUAUCCgg  cc cg  
acg  - g       a     CU         C          ug  -  g 


Annotation confidence Not enough data
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Genome context
AKHW03007029.1: 114258-114353 [-]

Database links

Mature ami-miR-26-5p

Accession MIMAT0038064
Description Alligator mississippiensis ami-miR-26-5p mature miRNA
Sequence 19 - UUCAAGUAAUCCAGGAUAGGCU - 40
Evidence experimental
Illumina [1]

Mature ami-miR-26-2-3p

Accession MIMAT0038066
Description Alligator mississippiensis ami-miR-26-2-3p mature miRNA
Sequence 57 - CCUAUUCUCGAUUACUUGUCU - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196