miRBase entry: ami-mir-32

Stem-loop ami-mir-32


Accession
MI0029697
Description
Alligator mississippiensis ami-mir-32 precursor miRNA


Sequence

ugcuugcucugguggauaUAUUGCACAUUACUAAGUUGCAuguugucacggccucagugCAAUUUAGUGUGUGCGAUAUUuucacaugagugcau
(((..((((..(((((.(((((((((((.((((((((((((((((...))))....))))))))))))))))))))))).)))))..))))))).

Structure
-   uu    ug     u           U            ----    u 
 ugc  gcuc  gugga aUAUUGCACAU ACUAAGUUGCAu    guug  
 |||  ||||  ||||| ||||||||||| ||||||||||||    |||| c
 acg  ugag  cacuu UAUAGCGUGUG UGAUUUAACgug    cggc  
u   --    ua     U           -            acuc    a 


Annotation confidence Not enough data
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Genome context
AKHW03006597.1: 2619253-2619347 [-]

Database links

Mature ami-miR-32-5p

Accession MIMAT0038090
Description Alligator mississippiensis ami-miR-32-5p mature miRNA
Sequence 19 - UAUUGCACAUUACUAAGUUGCA - 40
Evidence experimental
Illumina [1]

Mature ami-miR-32-3p

Accession MIMAT0038091
Description Alligator mississippiensis ami-miR-32-3p mature miRNA
Sequence 60 - CAAUUUAGUGUGUGCGAUAUU - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196