miRBase entry: ami-mir-124-2

Stem-loop ami-mir-124-2


Accession
MI0029718
Description
Alligator mississippiensis ami-mir-124-2 precursor miRNA


Sequence

uucccggggcucucgccucucCGUGUUCACAGCGGACCUUGAUuuaaugucauacaauUAAGGCACGCGGUGAAUGCCAagagcggagccggaag
((((...(((((.(((.(((..((((((((.(((..((((((((...........))))))))..))).))))))))..))))))))))))))).

Structure
-    cgg     u   c   cC        A   GA        uaau 
 uucc   ggcuc cgc ucu  GUGUUCAC GCG  CCUUGAUu    g
 ||||   ||||| ||| |||  |||||||| |||  ||||||||    u
 aagg   ccgag gcg aga  CGUAAGUG CGC  GGAAUuaa    c
g    ---     -   -   AC        G   AC        caua 


Annotation confidence Not enough data
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Genome context
AKHW03005657.1: 12011211-12011305 [-]

Database links

Mature ami-miR-124-5p

Accession MIMAT0038125
Description Alligator mississippiensis ami-miR-124-5p mature miRNA
Sequence 22 - CGUGUUCACAGCGGACCUUGAU - 43
Evidence experimental
Illumina [1]

Mature ami-miR-124-3p

Accession MIMAT0038126
Description Alligator mississippiensis ami-miR-124-3p mature miRNA
Sequence 59 - UAAGGCACGCGGUGAAUGCCA - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196