miRBase entry: ami-mir-128-1

Stem-loop ami-mir-128-1


Accession
MI0029725
Description
Alligator mississippiensis ami-mir-128-1 precursor miRNA


Sequence

caugagcuguuggauuCGGGGCCGUAACACUGUCUGAGAggguuacauuucUCACAGUGAACCGGUCUCUUUuucagcugcuuccug
...((((.((((((...(((((((...((((((..((((((......))))))))))))...)))))))...)))))).))))....

Structure
-cau    u      uuC       UAA      CU      gu 
    gagc guugga   GGGGCCG   CACUGU  GAGAgg  u
    |||| ||||||   |||||||   ||||||  ||||||   
    uucg cgacuu   CUCUGGC   GUGACA  CUcuuu  a
gucc    u      UUU       CAA      --      ac 


Annotation confidence Not enough data
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Genome context
AKHW03006853.1: 34149771-34149857 [-]

Database links

Mature ami-miR-128-5p

Accession MIMAT0038133
Description Alligator mississippiensis ami-miR-128-5p mature miRNA
Sequence 17 - CGGGGCCGUAACACUGUCUGAGA - 39
Evidence experimental
Illumina [1]

Mature ami-miR-128-3p

Accession MIMAT0038134
Description Alligator mississippiensis ami-miR-128-3p mature miRNA
Sequence 52 - UCACAGUGAACCGGUCUCUUU - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196