miRBase entry: ami-mir-129b

Stem-loop ami-mir-129b


Accession
MI0029728
Description
Alligator mississippiensis ami-mir-129b precursor miRNA


Sequence

cuucgcgaauCUUUUUGCGGUCUGGGCUUGCuguacauaacuaccuagccgggAAGCCCUUACCCCAAAAAGCAUucgcggag
(((((((((((((((((.(((..((((((.(((................))).))))))..))).))))))).))))))))))

Structure
          -       C   CU      G   uacauaa 
cuucgcgaau CUUUUUG GGU  GGGCUU Cug       c
|||||||||| ||||||| |||  |||||| |||        
gaggcgcuUA GAAAAAC CCA  CCCGAA ggc       u
          C       C   UU      g   cgaucca 


Annotation confidence Not enough data
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Genome context
AKHW03006283.1: 10867512-10867594 [-]

Database links

Mature ami-miR-129b-5p

Accession MIMAT0038138
Description Alligator mississippiensis ami-miR-129b-5p mature miRNA
Sequence 11 - CUUUUUGCGGUCUGGGCUUGC - 31
Evidence experimental
Illumina [1]

Mature ami-miR-129b-3p

Accession MIMAT0038139
Description Alligator mississippiensis ami-miR-129b-3p mature miRNA
Sequence 54 - AAGCCCUUACCCCAAAAAGCAU - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196