Stem-loop ami-mir-150

Accession

MI0029756

Description

Alligator mississippiensis ami-mir-150 precursor miRNA

Sequence

ccuucucugccccccacucUCUCCCAACCCUUGUACCAGUGucauguuacuggaaccCUGGUACAGAGGAUGGAUGAGAaggaggcgugggacccca
...((((((((.((...((((..(((.((.(((((((((..(((......)))....))))))))).)).)))..)))).)).)))).)))).....

Structure

--ccu    -    c  cac    UC   A  C         --UG   ug 
     ucuc ugcc cc   ucUC  CCA CC UUGUACCAG    uca  u
     |||| |||| ||   ||||  ||| || |||||||||    |||   
     aggg gcgg gg   AGAG  GGU GG GACAUGGUC    ggu  u
acccc    u    a  --a    UA   A  A         ccaa   ca 

Annotation confidence Not enough data

Genome context

AKHW03004263.1: 79977-80073 [-]

Mature ami-miR-150-5p

• Accession: MIMAT0038180
• Description: Alligator mississippiensis ami-miR-150-5p mature miRNA
• Sequence: 20 - UCUCCCAACCCUUGUACCAGUG - 41
• Evidence: experimental ; Illumina [1]

Mature ami-miR-150-3p

• Accession: MIMAT0038181
• Description: Alligator mississippiensis ami-miR-150-3p mature miRNA
• Sequence: 58 - CUGGUACAGAGGAUGGAUGAGA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196