miRBase entry: ami-mir-152

Stem-loop ami-mir-152


Accession
MI0029757
Description
Alligator mississippiensis ami-mir-152 precursor miRNA


Sequence

guccucucagcucAGGUUCUGUGGUACACUUGGACucggacucuggagcagUCAGUGCAUGACAGAACUUGGguuuggauggac
(((((((.((((((((((((((.((.((((.((.(((........)))...)))))).)).)))))))))))))).))).))))

Structure
    -   c              G  A    U  --A   gga 
gucc ucu agcucAGGUUCUGU GU CACU GG   Cuc   c
|||| ||| |||||||||||||| || |||| ||   |||    
cagg agg uugGGUUCAAGACA UA GUGA CU   gag   u
    u   u              G  C    -  gac   guc 


Annotation confidence Not enough data
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Genome context
AKHW03000817.1: 2942464-2942547 [-]

Database links

Mature ami-miR-152-5p

Accession MIMAT0038182
Description Alligator mississippiensis ami-miR-152-5p mature miRNA
Sequence 14 - AGGUUCUGUGGUACACUUGGAC - 35
Evidence experimental
Illumina [1]

Mature ami-miR-152-3p

Accession MIMAT0038183
Description Alligator mississippiensis ami-miR-152-3p mature miRNA
Sequence 52 - UCAGUGCAUGACAGAACUUGG - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196