miRBase entry: ami-mir-365-2

Stem-loop ami-mir-365-2


Accession
MI0029819
Description
Alligator mississippiensis ami-mir-365-2 precursor miRNA


Sequence

guggcagcaagaaaaaugAGGGACUUUCAGGGGCAGCUGUguuuuacuaacccagucaUAAUGCCCCUAAAAAUCCUUAuuguucuugcaauguucaa
..(((((((((((.((((((((..(((.(((((((((((.(((.....))).)))).....))))))).))).)))))))).)))))))..))))...

Structure
-gu    --       a        AC   C       -----    U   u 
   ggca  gcaagaa aaugAGGG  UUU AGGGGCA     GCUG guu u
   ||||  ||||||| ||||||||  ||| |||||||     |||| ||| a
   uugu  cguucuu uuAUUCCU  AAA UCCCCGU     ugac caa c
aac    aa       g        -A   A       AAUac    c   u 


Annotation confidence Not enough data
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Genome context
AKHW03004113.1: 5161026-5161123 [-]

Database links

Mature ami-miR-365-3p

Accession MIMAT0038272
Description Alligator mississippiensis ami-miR-365-3p mature miRNA
Sequence 59 - UAAUGCCCCUAAAAAUCCUUA - 79
Evidence experimental
Illumina [1]

Mature ami-miR-365-2-5p

Accession MIMAT0038273
Description Alligator mississippiensis ami-miR-365-2-5p mature miRNA
Sequence 19 - AGGGACUUUCAGGGGCAGCUGU - 40
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196