miRBase entry: ami-mir-383

Stem-loop ami-mir-383


Accession
MI0029822
Description
Alligator mississippiensis ami-mir-383 precursor miRNA


Sequence

cgccaagucaccugcuccucAGAUCAGAAGGUGAUUGUGGcuuugaguagauauuaagcagccacagcacugccuggucagaaagagcaaguguacuagcc
.((..((((((.(((((.((.((((((..((((.((((((((((((.......))))..))))))))))))..)))))).))..))))).))).))).)).

Structure
c  ca   -   c     -c  A      AA    A        --    gu 
 gc  agu cac ugcuc  uc GAUCAG  GGUG UUGUGGcu  uuga  a
 ||  ||| ||| |||||  || ||||||  |||| ||||||||  ||||  g
 cg  uca gug acgag  ag cugguc  ucac gacaccga  aauu  a
c  -a   u   a     aa  a      cg    -        cg    au 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
AKHW03000533.1: 47528493-47528593 [-]

Database links

Mature ami-miR-383-5p

Accession MIMAT0038276
Description Alligator mississippiensis ami-miR-383-5p mature miRNA
Sequence 21 - AGAUCAGAAGGUGAUUGUGG - 40
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196