miRBase entry: ami-mir-459

Stem-loop ami-mir-459


Accession
MI0029833
Description
Alligator mississippiensis ami-mir-459 precursor miRNA


Sequence

uuguuucuugcaaUCAGUAACAAGGAUUCAUCUCUGuauugugugaagaacagagagagucuuuguaacuaagugcaaguaauagcca
(((((.((((((...(((.((((((((((.(((((((.((......)).))))))))))))))))).)))...)))))).)))))...

Structure
---     u      aUC   A          A       a  gu 
   uuguu cuugca   AGU ACAAGGAUUC UCUCUGu uu  g
   ||||| ||||||   ||| |||||||||| ||||||| ||   
   gauaa gaacgu   uca uguuucugag agagaca ga  u
acc     u      gaa   a          -       a  ag 


Annotation confidence Not enough data
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Genome context
AKHW03006231.1: 50777058-50777145 [+]

Database links

Mature ami-miR-459-5p

Accession MIMAT0038291
Description Alligator mississippiensis ami-miR-459-5p mature miRNA
Sequence 14 - UCAGUAACAAGGAUUCAUCUCUG - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196