miRBase entry: ami-mir-497

Stem-loop ami-mir-497


Accession
MI0029838
Description
Alligator mississippiensis ami-mir-497 precursor miRNA


Sequence

caggcccagccccgcccCAGCAGCACAUCAUGGUUUGUggggucucguggcaCAGACCAUGGCGUGGUGCUACCgcggggccggggagac
....(((.(((((((...((((.(((.((((((((((((...........)))))))))))).))).))))...))))))).))).....

Structure
-cagg   a       ccC    G   A            gggu 
     ccc gccccgc   AGCA CAC UCAUGGUUUGUg    c
     ||| |||||||   |||| ||| ||||||||||||    u
     ggg cggggcg   UCGU GUG GGUACCAGACac    c
cagag   c       CCA    G   C            ggug 


Annotation confidence Not enough data
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Genome context
AKHW03004623.1: 56255-56344 [-]

Database links

Mature ami-miR-497-5p

Accession MIMAT0038299
Description Alligator mississippiensis ami-miR-497-5p mature miRNA
Sequence 18 - CAGCAGCACAUCAUGGUUUGU - 38
Evidence experimental
Illumina [1]

Mature ami-miR-497-3p

Accession MIMAT0038300
Description Alligator mississippiensis ami-miR-497-3p mature miRNA
Sequence 53 - CAGACCAUGGCGUGGUGCUACC - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196