Stem-loop ami-mir-551-2

Accession

MI0029841

Description

Alligator mississippiensis ami-mir-551-2 precursor miRNA

Sequence

caugacccaauggcuccagaaaucaaggguggguaagaccucguaagaacaguugaagGCGACCCAUACUUGGUUUCAggggcuuugaggguauaguc
....((((...((((((.(((((((((.((((((..(.(((((..........)).)))).)))))).))))))))).))))))....))))......

Structure

--caug    -aau      a         g      aa a   -  uaag 
      accc    ggcucc gaaaucaag gugggu  g ccu cg    a
      ||||    |||||| ||||||||| ||||||  | ||| ||     
      uggg    ucgggg CUUUGGUUC UACCCA  C Gga gu    a
cugaua    aguu      A         A      -G -   a  ugac 

Annotation confidence Not enough data

Genome context

AKHW03003627.1: 25828083-25828180 [+]

Mature ami-miR-551-3p

• Accession: MIMAT0038304
• Description: Alligator mississippiensis ami-miR-551-3p mature miRNA
• Sequence: 59 - GCGACCCAUACUUGGUUUCA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196