miRBase entry: ami-mir-1329

Stem-loop ami-mir-1329


Accession
MI0029846
Description
Alligator mississippiensis ami-mir-1329 precursor miRNA


Sequence

ggucugguuguagagaUACAGUGAUCAGGUUACGAUGAUuucucaaguaacaaccucguagcuugaucacaauaucccuaugacuuagauaa
.((((((((((((.((((..((((((((((((((((((....)))..........)))))))))))))))..)))).))))))).)))))..

Structure
-g     -       a    CA               ----------   U 
  gucug guuguag gaUA  GUGAUCAGGUUACGA          UGA u
  ||||| ||||||| ||||  |||||||||||||||          |||  
  uagau caguauc cuau  cacuaguucgaugcu          acu u
aa     u       c    aa               ccaacaauga   c 


Annotation confidence Not enough data
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Genome context
AKHW03003826.1: 10607146-10607237 [+]

Database links

Mature ami-miR-1329-5p

Accession MIMAT0038311
Description Alligator mississippiensis ami-miR-1329-5p mature miRNA
Sequence 17 - UACAGUGAUCAGGUUACGAUGAU - 39
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196