Stem-loop ami-mir-1662

Accession

MI0029851

Description

Alligator mississippiensis ami-mir-1662 precursor miRNA

Sequence

gcagagcugugcucuauggguUUGACAUCAUCAUACUUGGGAuguaugucacaaagucccaagaaggcugaugucaggcccaagauugcugccauccuguc
((((.((.(((.(((.((((((((((((((.(...((((((((............))))))))...).))))))))))))))))).))).))....)))).

Structure

-    ---a  u   c   a              U AUA        guaug 
 gcag    gc gug ucu uggguUUGACAUCA C   CUUGGGAu     u
 ||||    || ||| ||| |||||||||||||| |   ||||||||      
 uguc    cg cgu aga acccggacuguagu g   gaacccug     c
c    cuac  u   u   -              c gaa        aaaca 

Annotation confidence Not enough data

Genome context

AKHW03000487.1: 29917407-29917507 [+]

Mature ami-miR-1662-5p

• Accession: MIMAT0038318
• Description: Alligator mississippiensis ami-miR-1662-5p mature miRNA
• Sequence: 22 - UUGACAUCAUCAUACUUGGGA - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196