Stem-loop ami-mir-9602

Accession

MI0029869

Description

Alligator mississippiensis ami-mir-9602 precursor miRNA

Sequence

ggggucaggagggcaGGGCAGCCUGACUCGCAGCAGAgagcugaugccuguaccugUGCUGAGGGUCAGGCUGGACUGcagccacccuggcucg
.((((((((..(((((..(((((((((((.(((((.((.((........))..)).))))).)))))))))))..))...)))..)))))))).

Structure

g        ag   ---  GG           G     G  -a  uga 
 gggucagg  ggc   aG  CAGCCUGACUC CAGCA Ag  gc   u
 ||||||||  |||   ||  ||||||||||| ||||| ||  ||    
 cucggucc  ccg   UC  GUCGGACUGGG GUCGU uc  ug   g
g        ca   acG  AG           A     g  ca  ucc 

Annotation confidence Not enough data

Genome context

AKHW03004154.1: 18043982-18044075 [-]

Mature ami-miR-9602-5p

• Accession: MIMAT0038348
• Description: Alligator mississippiensis ami-miR-9602-5p mature miRNA
• Sequence: 16 - GGGCAGCCUGACUCGCAGCAGA - 37
• Evidence: experimental ; Illumina [1]

Mature ami-miR-9602-3p

• Accession: MIMAT0038349
• Description: Alligator mississippiensis ami-miR-9602-3p mature miRNA
• Sequence: 57 - UGCUGAGGGUCAGGCUGGACUG - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196