Stem-loop ami-mir-9608

Accession

MI0029875

Description

Alligator mississippiensis ami-mir-9608 precursor miRNA

Sequence

caggucccuucuGGUUCUACACUUCUAUGAUUCUguaaaaggggAAUCAUAGGCUUGGAGAAUGGCAaggggucag
..((((((((.(.(((((.((..(((((((((((........)))))))))))..)).))))).).))))))))..

Structure

ca        c G     A  CU           gua 
  ggucccuu u GUUCU CA  UCUAUGAUUCU   a
  |||||||| | ||||| ||  |||||||||||    
  cuggggaA G UAAGA GU  GGAUACUAAgg   a
ga        C G     G  UC           gga 

Annotation confidence Not enough data

Genome context

AKHW03002956.1: 4146963-4147038 [-]

Mature ami-miR-9608-5p

• Accession: MIMAT0038360
• Description: Alligator mississippiensis ami-miR-9608-5p mature miRNA
• Sequence: 13 - GGUUCUACACUUCUAUGAUUCU - 34
• Evidence: experimental ; Illumina [1]

Mature ami-miR-9608-3p

• Accession: MIMAT0038361
• Description: Alligator mississippiensis ami-miR-9608-3p mature miRNA
• Sequence: 45 - AAUCAUAGGCUUGGAGAAUGGCA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196