miRBase entry: cli-let-7a-2

Stem-loop cli-let-7a-2


Accession
MI0029883
Description
Columba livia cli-let-7a-2 precursor miRNA


Sequence

ugcauccagguUGAGGUAGUAGGUUGUAUAGUUuagaauuacaccaagggagauaaCUGUACAACCUCCUAGCUUUCCuu
.......(((..(((.(((.(((((((((((((.....................))))))))))))).))).))).))).

Structure
ugcaucc   uU   G   U             uagaauuac 
       agg  GAG UAG AGGUUGUAUAGUU         a
       |||  ||| ||| |||||||||||||         c
       uCC  UUC AUC UCCAACAUGUCaa         c
------u   -U   G   C             uagagggaa 


Annotation confidence Not enough data
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Genome context
KB375651.1: 862705-862784 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cli-let-7a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cli-let-7a-5p

Accession MIMAT0038374
Description Columba livia cli-let-7a-5p mature miRNA
Sequence 12 - UGAGGUAGUAGGUUGUAUAGUU - 33
Evidence experimental
Illumina [1]

Mature cli-let-7a-2-3p

Accession MIMAT0038376
Description Columba livia cli-let-7a-2-3p mature miRNA
Sequence 57 - CUGUACAACCUCCUAGCUUUCC - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196