miRBase entry: cli-let-7b

Stem-loop cli-let-7b

Accession

MI0029886

Description

Columba livia cli-let-7b precursor miRNA

Sequence

ggaugagguaguagguugugugguuucaggguagugauuuugccccagucaggagauaaCUAUACAACCUACUGCCUUCCcugauaagcagcauaacaac
(((..((((((((((((((((((((...((((((.....))))))..(((....))))))))))))))))))))))))))(((.....))).........

Structure

--------------------   ug                    ---------uca      u 
                    gga  agguaguagguugugugguu            ggguag g
                    |||  ||||||||||||||||||||            |||||| a
                    CCU  UCCGUCAUCCAACAUAUCaa            cccguu u
caacaauacgacgaauaguc   --                    uagaggacugac      u

Annotation confidence Not enough data

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Genome context

KB375672.1: 359882-359981 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cli-let-7b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-let-7b-3p

Accession	MIMAT0038378
Description	Columba livia cli-let-7b-3p mature miRNA
Sequence	60 - CUAUACAACCUACUGCCUUCC - 80
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196